Frealix seems to have trouble splitting the ali file, no error message
I'm learning how to use frealix for 3D reconstructions. I'm using 3 micrographs of synthetic amyloid fibrils. I selected 14 filaments (5 points per filament). When I run this command:
./flx_wrap.rb -r 1 -f 20 -s 20 -t 20 -n 1 --threads 2 -a waypoints.ali parameter_startup.flx
then a new folder for round 00 is created, the waypoints file is copied into it, and in the terminal it says:
I, [2017-08-23 12:44:01 #6814] INFO -- flx_wrap: Thanks for using Frealix! Let's get to work...