frealign9 Normal termination, no output data-files
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I am switching from 8.11 to 9.09. The refinement seems went well but the reconstruction does not generate valid output. In the end, the log shows
"Time before particle 1 was 14:42:14
Time before particle 2 was 14:42:14
Time before particle 11 was 14:42:16
Time before particle 100 was 14:42:35
PARTICLES BELOW THRESHOLD (NOT INCLUDED) IN SET 1: 45
55 PARTICLES FOR OVERALL SCORE CALCULATION
SCORE (between resolution limits) = 7.625455
AVERAGE OCCUPANCY = 100.000000
Normal termination, no output data-files
"
My input parameter as follows. I look into the code and could not figure out why FALL turns to FALSE while it is set to TRUE explicitly in the frealign_v9.f?
time frealign9mp < & rnd${1}.log &
M,0,F,F,F,F,0,F,T,F,F,0,T,0,1
225.0,50.0,1.62,6000.0,0.07,0.0,5.0,0.0,10.0,25,10
1,1,1,1,1
1,100
I2
1.0,14.0,60.0,0.0,2.7,300.0,0.0,0.0
7.25,900.0,10.0,10.0,100.0,0.0
../F2Corrb2.mrc
rnd{1}_proj.mrc
F2Corrb2_v9r${1}.para
rnd${1}.para
rnd${1}.shft
-100., 0., 0., 0., 0., 0., 0., 0. ! terminator with RELMAG=0.0
F2Corrb2_3Dr${1}.mrc
rnd${1}_weights
rnd${1}_map1.mrc
rnd${1}_map2.mrc
rnd${1}_phasediffs
rnd${1}_pointspread
Thanks you very much for your help.
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